PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thecc1EG023491t8
Common NameTCM_023491
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
Family bZIP
Protein Properties Length: 307aa    MW: 34347.6 Da    PI: 9.4671
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thecc1EG023491t8genomeCGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.53.3e-091761145
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1  1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                      ek  +  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Thecc1EG023491t8 17 EKNQRTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 61
                      56677889************************9777777666555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.5E-81264No hitNo description
SMARTSM003381.7E-71780IPR004827Basic-leucine zipper domain
PfamPF001702.0E-61761IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.1971963IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.44E-72164No hitNo description
PROSITE patternPS0003602439IPR004827Basic-leucine zipper domain
PfamPF141443.5E-32103178IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MADASPRTDT STDDTDEKNQ RTLRRLAQNR EAARKSRLRK KAYVQQLESS RLKLTQLEQE  60
LQRARQQGIF ISSSGDQSHS MSGNGALAFD VEYARWLEEH NRQINELRAA VNSHAGDTEL  120
RTIVDNVTAH FDDIFRLKGI AAKADVFHVL SGMWKTPAER CFLWIGGFRS SELLKLLANQ  180
LEPLTEQQFM GIHNLQQSSQ QAEDALSQGM EALQQSLAET LTNGSPGPSG SSGNVANYMG  240
QMAMAMGKLG TLEGFVRQAD NLRQQTLQQM HRILTTRQSA RALLAINDYF SRLRALSSLW  300
LARPRE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007028142.10.0Transcription factor HBP-1b(c1) isoform 8
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A061F2B30.0A0A061F2B3_THECC; Transcription factor HBP-1b(C1) isoform 8
STRINGGLYMA15G37220.20.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-140bZIP family protein
Publications ? help Back to Top
  1. Motamayor JC, et al.
    The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
    Genome Biol., 2013. 14(6): p. r53
    [PMID:23731509]